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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
8
ChIP-seq
1
GRO-seq
Assay category
14
Transcription
8
DNA binding
Target of assay
7
control
1
histone
1
histone modification
1
narrow histone mark
Date released
8
August, 2021
7
February, 2018
5
December, 2017
2
May, 2021
1
January, 2018
Available data
36
bam
29
bigWig
27
fastq
bed narrowPeak
14
tsv
3
bed bed3+
Organism
23
Homo sapiens
Biosample type
15
in vitro differentiated cells
8
cell line
Organ
585
connective tissue
475
adipose tissue
443
pancreas
339
liver
188
heart
155
kidney
150
bone element
84
blood vessel
84
vasculature
71
brain
69
epithelium
65
artery
30
limb
26
eye
musculature of body
23
embryo
19
lung
16
nerve
10
spleen
8
skeleton
7
blood
7
bodily fluid
4
gonad
4
ovary
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
spinal cord
1
thymus
Project
23
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
1
hg18
Lab
23
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
biosample_type!
primary cell
files.file_type!
bed narrowPeak
month_released!
March, 2020
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
23 results
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Clear Filters
total RNA-seq
ChIP-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
4
6
1
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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