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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
1
ATAC-seq
1
pCHi-C
Assay category
60
DNA binding
1
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
1
January, 2018
1
March, 2020
Available data
60
bam
60
fastq
55
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
1
tsv
Organism
62
Homo sapiens
Biosample type
61
cell line
primary cell
1
tissue
Organ
777
liver
631
connective tissue
580
pancreas
488
adipose tissue
344
heart
318
kidney
264
brain
164
blood vessel
164
vasculature
150
bone element
122
limb
104
artery
103
epithelium
82
musculature of body
61
blood
61
bodily fluid
43
nerve
37
embryo
25
eye
25
spleen
20
lung
18
ureter
8
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
62
AMP
Genome assembly (visualization)
55
hg19
54
GRCh38
Lab
62
AMP-T2D consortium
Audit category:
1
inconsistent control
biosample_type!
primary cell
files.file_type!
bedpe
month_released!
February, 2023
BIOSAMPLE
ASSAY
62 results
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ChIP-seq
ATAC-seq
pCHi-C
cell line
GM12878
60
1
tissue
adrenal gland
1
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