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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ATAC-seq
15
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
2
snATAC-seq
1
single cell RNA-seq
Assay category
78
DNA accessibility
16
Transcription
Date released
269
August, 2021
126
August, 2017
118
February, 2021
99
February, 2023
96
October, 2019
72
November, 2017
47
September, 2023
44
May, 2021
43
March, 2020
29
October, 2018
26
May, 2022
26
November, 2019
25
February, 2020
24
May, 2020
22
May, 2019
19
April, 2020
19
December, 2017
15
April, 2019
15
May, 2023
14
July, 2019
9
October, 2017
8
February, 2018
8
January, 2021
7
November, 2018
6
September, 2017
5
December, 2018
5
March, 2019
4
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2020
1
August, 2018
1
August, 2022
1
October, 2022
Available data
53
bed narrowPeak
10
bed bed3
7
txt
4
bed bed3+
3
bed bedgraph
bigWig
2
tsv
Organism
99
Homo sapiens
Biosample type
81
tissue
primary cell
13
in vitro differentiated cells
5
cell line
Organ
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
19
pancreas
epithelium
14
connective tissue
8
bone element
8
skeleton
1
adipose tissue
1
brain
Project
76
AMP
23
T1D
Genome assembly (visualization)
35
GRCh38
30
hg19
Lab
76
AMP-T2D consortium
23
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
biosample_type!
primary cell
files.file_type!
bigWig
lab.title!
Karen Mohlke, UNC
organ_slims!
epithelium
BIOSAMPLE
ASSAY
99 results
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Clear Filters
ATAC-seq
total RNA-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
snATAC-seq
single cell RNA-seq
tissue
coronary artery
35
islet of Langerhans
11
5
2
retina
15
2
acetabular part of hip bone
1
1
ilium
1
1
+ See 5 more…
in vitro differentiated cells
chondrocyte
5
immature adipocyte
2
2
adipocyte
1
1
preadipocyte
1
1
cell line
EndoC_BH1
3
2
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