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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
142
ChIP-seq
5
MeRIP-seq
Assay category
142
DNA binding
Target of assay
603
histone
603
histone modification
323
narrow histone mark
280
broad histone mark
147
control
50
transcription factor
19
RNA binding protein
7
recombinant protein
5
nucleotide modification
Date released
31
October, 2019
23
May, 2020
20
May, 2019
19
August, 2017
14
April, 2019
12
November, 2017
11
August, 2021
6
May, 2021
5
November, 2020
2
November, 2019
2
October, 2018
1
February, 2021
1
October, 2017
Available data
265
bam
fastq
64
tagAlign
13
bigWig
9
bed bed3+
Organism
147
Homo sapiens
Biosample type
113
tissue
19
cell line
primary cell
15
in vitro differentiated cells
Organ
30
liver
23
brain
23
pancreas
18
blood vessel
18
heart
18
vasculature
17
limb
11
nerve
artery
9
kidney
7
connective tissue
6
epithelium
5
adipose tissue
4
musculature of body
Project
147
AMP
Lab
133
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Rohit N. Kulkarni, M.D., Ph.D.
4
Bing Ren, UCSD
Audit category:
8
inconsistent ontology term
biosample_type!
primary cell
files.file_type!
fastq
organ_slims!
artery
vein
BIOSAMPLE
ASSAY
147 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
liver
26
tibial nerve
11
islet of Langerhans
6
2
heart left ventricle
6
kidney
6
+ See 30 more…
cell line
Panc1
6
EndoC_BH1
2
3
HepG2
4
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
+ See 2 more…
in vitro differentiated cells
neural progenitor cell
7
embryonic stem cell
5
adipocyte
2
pancreatic PP cell
1
See all biosamples
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