Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Embedding Matrix
Click or enter search terms to filter the experiments included in the matrix.
Embeddings type
37
Gene expression
10
Accessible chromatin
Date released
27
May, 2022
8
April, 2025
2
June, 2025
2
October, 2024
2
September, 2021
1
February, 2021
1
February, 2023
1
July, 2025
1
March, 2023
1
November, 2021
1
September, 2020
Available data
44
h5ad
rds
9
tsv
7
mtx
1
bed bed3
1
cloupe
1
tbi
Organism
44
Homo sapiens
Biosample type
48
tissue
primary cell
Organ
6
musculature of body
6
pancreas
3
adipose tissue
3
connective tissue
3
liver
3
lung
3
vasculature
2
artery
2
blood vessel
2
bone element
2
heart
2
intestine
2
kidney
2
mouth
1
blood
1
bodily fluid
1
bone marrow
1
eye
1
large intestine
1
lymph node
1
mammary gland
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
thymus
1
tongue
1
trachea
1
uterus
Project
42
AMP
2
LungMap
2
community
1
ENCODE
Genome assembly (visualization)
1
hg19
Encyclopedia version
1
fusion_consented.snrna_post_decontx.h5ad
biosample_type!
primary cell
files.file_type!
rds
BIOSAMPLE
TYPE
47 results
search-icon
table-tab-icon
Clear Filters
Gene expression
Accessible chromatin
tissue
heart
3
islet of Langerhans
1
2
liver
2
1
lung
2
1
pancreas
3
+ See 25 more…
See all biosamples