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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
374
ChIP-seq
Assay category
374
DNA binding
Target of assay
770
histone modification
769
histone
503
transcription factor
narrow histone mark
373
broad histone mark
306
control
103
RNA binding protein
89
recombinant protein
35
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
94
August, 2017
56
May, 2019
50
November, 2017
43
October, 2019
37
April, 2019
20
May, 2024
19
October, 2018
15
December, 2017
10
May, 2021
10
October, 2017
8
August, 2021
8
February, 2018
November, 2019
4
January, 2019
Available data
304
bigWig
303
bed narrowPeak
273
bam
221
bigBed narrowPeak
96
tagAlign
86
fastq
28
bed broadPeak
11
bed bed3+
8
bigBed broadPeak
Organism
370
Homo sapiens
Biosample type
303
tissue
primary cell
57
in vitro differentiated cells
13
cell line
1
stem cell
Organ
70
brain
57
heart
45
pancreas
41
connective tissue
41
liver
36
blood vessel
36
vasculature
34
limb
20
adipose tissue
16
musculature of body
16
nerve
14
artery
10
kidney
7
epithelium
4
embryo
4
spleen
Project
374
AMP
Genome assembly (visualization)
291
GRCh38
248
hg19
Lab
343
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
10
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
4
missing controlled_by
Audit category:
15
inconsistent control read length
1
inconsistent assembly
biosample_type!
primary cell
files.file_type!
txt
month_released!
November, 2019
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
374 results
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Clear Filters
ChIP-seq
tissue
liver
22
left cardiac atrium
20
subcutaneous abdominal adipose tissue
20
tibial nerve
16
heart left ventricle
15
+ See 26 more…
in vitro differentiated cells
adipocyte
21
embryonic stem cell
11
hepatocyte
7
neural progenitor cell
7
pancreatic endoderm
4
+ See 5 more…
cell line
HepG2
9
Panc1
4
stem cell
hESC
1
See all biosamples
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