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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
226
ChIP-seq
Assay category
226
DNA binding
Target of assay
267
control
226
histone modification
225
histone
171
narrow histone mark
77
transcription factor
53
broad histone mark
10
RNA binding protein
8
recombinant protein
2
chromatin remodeller
Date released
104
October, 2019
47
August, 2017
27
May, 2020
13
August, 2021
10
February, 2018
10
November, 2019
8
December, 2017
3
March, 2020
2
May, 2021
2
November, 2017
Available data
628
bigWig
624
bed narrowPeak
570
bam
bigBed narrowPeak
223
tagAlign
145
fastq
49
bed broadPeak
20
bed bed3+
14
bigBed broadPeak
1
tagAlign bed3+
Organism
226
Homo sapiens
Biosample type
primary cell
154
tissue
55
in vitro differentiated cells
15
cell line
2
stem cell
Organ
75
brain
42
liver
30
pancreas
25
connective tissue
15
epithelium
embryo
5
heart
2
kidney
1
pituitary gland
Project
222
AMP
4
T1D
Genome assembly (visualization)
224
hg19
215
GRCh38
Lab
226
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
9
inconsistent control read length
biosample_type!
primary cell
files.file_type!
bigBed narrowPeak
organ_slims!
embryo
BIOSAMPLE
ASSAY
226 results
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Clear Filters
ChIP-seq
tissue
liver
40
islet of Langerhans
16
brain
5
heart
5
superior frontal gyrus
4
+ See 73 more…
in vitro differentiated cells
adipocyte
25
neural progenitor cell
13
definitive endodermal cell
4
primitive gut cell
4
Posterior foregut
2
+ See 4 more…
cell line
EndoC_BH1
12
HepG2
2
Panc1
1
stem cell
hESC
2
See all biosamples
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