Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ATAC-seq
10
total RNA-seq
Assay category
19
DNA accessibility
10
Transcription
Date released
18
May, 2022
10
August, 2021
1
March, 2019
Available data
160
bed narrowPeak
85
bigWig
txt
64
xls
26
fastq
25
bam
10
tsv
3
bed bedgraph
3
hic
2
bed bed3+
2
bed broadPeak
2
bedpe bed3+
1
bedpe
1
vcf
Organism
29
Homo sapiens
Biosample type
primary cell
20
tissue
9
cell line
Organ
20
pancreas
9
liver
Project
29
AMP
Genome assembly (visualization)
18
hg19
Lab
AMP-T2D consortium
18
Kyle Gaulton, UCSD
10
Bing Ren, UCSD
1
Mark McCarthy, Oxford
biosample_type!
primary cell
files.file_type!
txt
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
29 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
tissue
islet of Langerhans
19
1
cell line
HepG2
9
Download