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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
552
ChIP-seq
Assay category
552
DNA binding
Target of assay
552
histone modification
551
histone
460
transcription factor
291
narrow histone mark
259
broad histone mark
245
control
89
recombinant protein
82
RNA binding protein
35
chromatin remodeller
5
other context
5
other post-translational modification
Date released
152
October, 2019
89
May, 2019
72
November, 2017
65
August, 2017
59
April, 2019
31
December, 2017
October, 2018
27
May, 2020
16
February, 2018
13
August, 2021
10
November, 2019
7
January, 2019
6
October, 2017
3
March, 2020
2
May, 2021
Available data
609
bigWig
605
bed narrowPeak
552
bam
314
bigBed narrowPeak
223
tagAlign
141
fastq
49
bed broadPeak
22
bed bed3+
14
bigBed broadPeak
1
tagAlign bed3+
Organism
546
Homo sapiens
Biosample type
436
tissue
primary cell
79
in vitro differentiated cells
35
cell line
2
stem cell
Organ
163
brain
77
liver
59
heart
54
blood vessel
54
vasculature
49
pancreas
48
limb
27
epithelium
26
connective tissue
24
nerve
20
artery
20
kidney
12
embryo
6
musculature of body
6
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
pituitary gland
Project
548
AMP
4
T1D
Genome assembly (visualization)
539
GRCh38
497
hg19
Lab
552
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
Audit category:
9
missing controlled_by
Audit category:
25
inconsistent control read length
1
inconsistent assembly
biosample_type!
primary cell
month_released!
July, 2019
October, 2018
BIOSAMPLE
ASSAY
552 results
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Clear Filters
ChIP-seq
tissue
liver
45
tibial nerve
24
heart left ventricle
23
kidney
20
tibial artery
18
+ See 94 more…
in vitro differentiated cells
adipocyte
25
neural progenitor cell
13
hepatocyte
12
pancreatic endoderm
10
definitive endodermal cell
4
+ See 7 more…
cell line
HepG2
15
EndoC_BH1
12
Panc1
7
GM12878
1
stem cell
hESC
2
See all biosamples
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