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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1248
candidate regulatory elements
936
target gene predictions
764
histone modifications
715
binding sites
401
accessible chromatin
40
variant allelic effects
34
chromatin state
5
eQTL
2
caQTL
2
pQTL
2
variant to gene
1
other
1
sQTL
Date released
2017
February, 2021
1257
September, 2022
229
June, 2020
190
February, 2024
104
May, 2021
70
October, 2022
46
May, 2020
44
March, 2020
39
January, 2020
36
August, 2021
32
November, 2022
28
August, 2017
27
February, 2023
11
November, 2019
5
September, 2023
4
October, 2019
3
January, 2022
3
September, 2018
2
May, 2022
1
April, 2019
1
August, 2020
1
August, 2022
Available data
4151
bed bed3+
654
bed bed9
292
tsv
122
bigWig
32
bigBed bed9
24
csv
7
bed bed9+
1
bam
Organism
4150
Homo sapiens
Biosample type
2119
cell line
1682
tissue
primary cell
344
in vitro differentiated cells
4
stem cell
Organ
278
brain
257
kidney
240
musculature of body
209
lung
205
intestine
181
bodily fluid
limb
172
blood
160
embryo
149
heart
131
large intestine
122
connective tissue
102
epithelium
89
pancreas
82
skin of body
82
stomach
80
extraembryonic component
78
eye
71
uterus
63
liver
60
small intestine
59
vasculature
58
bone element
55
prostate gland
54
lymph node
52
blood vessel
51
ureter
49
adipose tissue
47
placenta
46
adrenal gland
37
thymus
34
gonad
34
mammary gland
26
artery
26
spinal cord
26
spleen
24
esophagus
19
penis
19
testis
18
lymphoid tissue
15
ovary
15
skeleton
14
nerve
14
thyroid gland
11
pituitary gland
10
mouth
9
breast
7
tongue
7
urinary bladder
6
vagina
4
lymphatic vessel
nose
2
vein
Project
4149
AMP
1
ITG
1
T1D
Genome assembly (visualization)
4149
hg19
287
GRCh38
1
hg18
biosample_type!
primary cell
organ_slims!
limb
nose
BIOSAMPLE
TYPE
4151 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
eQTL
caQTL
pQTL
variant to gene
other
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 759 more…
tissue
heart
37
20
1
1
5
2
stomach
40
21
1
3
kidney
29
14
2
1
10
1
1
brain
29
16
3
1
2
1
lung
33
17
+ See 196 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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