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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
3
DNase-seq
1
pCHi-C
Assay category
3
DNA accessibility
3
DNA binding
Target of assay
2
transcription factor
1
control
Date released
3
August, 2017
3
November, 2018
1
February, 2021
Available data
593
bam
532
bigWig
421
fastq
358
bed narrowPeak
321
bigBed narrowPeak
169
tsv
47
bed broadPeak
47
bigBed broadPeak
27
tagAlign
7
bed bed3+
3
tar
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hic
1
bed bed3
1
csv
1
vcf
Organism
7
Homo sapiens
Biosample type
6
tissue
primary cell
1
cell line
Organ
68
kidney
36
limb
33
musculature of body
27
brain
27
heart
19
connective tissue
18
ureter
17
pancreas
7
liver
6
adipose tissue
5
blood vessel
5
vasculature
4
artery
3
eye
2
nerve
1
embryo
1
spleen
Project
7
AMP
Genome assembly (visualization)
7
hg19
6
GRCh38
Lab
7
AMP-T2D consortium
biosample_type!
primary cell
target.investigated_as!
histone
BIOSAMPLE
ASSAY
7 results
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Clear Filters
ChIP-seq
DNase-seq
pCHi-C
tissue
liver
3
2
right lobe of liver
1
cell line
HepG2
1
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