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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
319
ChIP-seq
Assay category
319
DNA binding
Target of assay
623
histone modification
622
histone
475
transcription factor
319
narrow histone mark
302
broad histone mark
95
RNA binding protein
88
recombinant protein
35
chromatin remodeller
13
control
5
other context
5
other post-translational modification
Date released
109
October, 2019
38
August, 2017
33
May, 2019
27
May, 2020
27
November, 2017
23
April, 2019
15
December, 2017
15
May, 2024
11
October, 2018
August, 2021
8
February, 2018
4
November, 2019
3
January, 2019
3
March, 2020
2
May, 2021
1
October, 2017
Available data
319
bigWig
316
bed narrowPeak
295
bam
123
bigBed narrowPeak
120
tagAlign
70
fastq
21
bed broadPeak
11
bed bed3+
6
bigBed broadPeak
1
tagAlign bed3+
Organism
317
Homo sapiens
Biosample type
268
tissue
primary cell
33
in vitro differentiated cells
17
cell line
1
stem cell
Organ
103
brain
48
liver
38
heart
38
pancreas
18
blood vessel
18
vasculature
14
connective tissue
14
epithelium
14
limb
10
kidney
8
nerve
7
embryo
7
musculature of body
6
artery
2
adipose tissue
2
spleen
1
blood
1
bodily fluid
1
pituitary gland
Project
315
AMP
4
T1D
Genome assembly (visualization)
299
GRCh38
288
hg19
Lab
304
AMP-T2D consortium
15
Patrick T. Ellinor, Broad
Audit category:
10
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
11
inconsistent control read length
biosample_type!
primary cell
month_released!
August, 2021
BIOSAMPLE
ASSAY
319 results
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Clear Filters
ChIP-seq
tissue
liver
34
left cardiac atrium
15
islet of Langerhans
12
kidney
10
heart left ventricle
9
+ See 98 more…
in vitro differentiated cells
adipocyte
12
hepatocyte
5
pancreatic endoderm
5
Hepatic endoderm
2
definitive endodermal cell
2
+ See 6 more…
cell line
HepG2
7
EndoC_BH1
6
Panc1
3
GM12878
1
stem cell
hESC
1
See all biosamples
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