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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
175
DNase-seq
35
ChIP-seq
2
ATAC-seq
Assay category
177
DNA accessibility
35
DNA binding
Target of assay
35
histone
35
histone modification
20
broad histone mark
15
narrow histone mark
Date released
163
June, 2019
27
August, 2017
6
November, 2017
6
November, 2018
5
October, 2019
4
October, 2017
1
March, 2019
Available data
1998
bam
1829
bigWig
1087
bed narrowPeak
1045
tsv
577
bigBed narrowPeak
482
fastq
229
bed bed3+
216
tagAlign
212
bed broadPeak
175
bigBed broadPeak
161
txt
64
xls
24
bed bedMethyl
24
bigBed bedMethyl
17
bedpe bed3+
15
hic
10
bed bed3
7
bed bedgraph
5
csv
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
Organism
206
Homo sapiens
Biosample type
210
tissue
primary cell
1
cell line
1
in vitro differentiated cells
Organ
68
kidney
liver
45
musculature of body
36
brain
36
limb
27
heart
21
pancreas
18
ureter
5
blood vessel
5
vasculature
4
artery
4
connective tissue
3
adipose tissue
3
eye
2
nerve
1
spleen
Project
212
AMP
Genome assembly (visualization)
195
hg19
190
GRCh38
Lab
210
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
1
inconsistent assembly
biosample_type!
primary cell
month_released!
July, 2018
November, 2020
organ_slims!
liver
BIOSAMPLE
ASSAY
212 results
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Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
tissue
heart
18
brain
14
3
muscle of arm
17
kidney
13
muscle of leg
13
+ See 43 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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