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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
164
ChIP-seq
27
DNase-seq
1
FAIRE-seq
Assay category
164
DNA binding
28
DNA accessibility
Target of assay
164
histone
164
histone modification
103
narrow histone mark
61
broad histone mark
Date released
75
October, 2019
58
November, 2017
25
June, 2019
25
May, 2019
6
October, 2017
2
November, 2018
1
July, 2019
Available data
226
bam
202
bigWig
192
bed narrowPeak
118
tagAlign
116
bigBed narrowPeak
36
bed broadPeak
27
bed bed3+
27
bigBed broadPeak
23
tsv
12
fastq
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
tagAlign bed3+
Organism
192
Homo sapiens
Biosample type
192
tissue
primary cell
Organ
435
liver
192
brain
185
heart
161
kidney
146
pancreas
112
blood vessel
112
vasculature
92
limb
74
artery
58
connective tissue
54
blood
54
bodily fluid
51
musculature of body
45
epithelium
30
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
8
bone element
8
skeleton
1
pituitary gland
Project
192
AMP
Genome assembly (visualization)
190
GRCh38
130
hg19
Lab
192
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
3
missing controlled_by
biosample_type!
primary cell
lab.title!
Klaus Kaestner, Upenn
month_released!
October, 2022
BIOSAMPLE
ASSAY
192 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
brain
11
14
layer of hippocampus
17
angular gyrus
14
caudate nucleus
12
1
temporal lobe
13
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