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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
March, 2020
October, 2019
2
August, 2021
2
November, 2019
Available data
2108
bam
1930
bigWig
1338
bed narrowPeak
905
fastq
873
tsv
867
bigBed narrowPeak
265
bed broadPeak
241
tagAlign
229
bigBed broadPeak
224
bed bed3+
161
txt
64
xls
24
bed bedMethyl
24
bigBed bedMethyl
11
bed bed3
7
bed bedgraph
6
csv
5
hic
4
bedpe bed3+
3
tar
1
bedpe
1
vcf
Organism
4
Homo sapiens
Biosample type
primary cell
2
cell line
2
tissue
Organ
3
pancreas
adipose tissue
1
connective tissue
1
epithelium
1
liver
Project
4
AMP
Genome assembly (visualization)
3
hg19
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
biosample_type!
primary cell
month_released!
March, 2020
October, 2019
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
4 results
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Hi-C
cell line
EndoC_BH1
1
HepG2
1
tissue
islet of Langerhans
2
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