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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
WGBS
9
RRBS
6
single cell RNA-seq
Assay category
25
DNA methylation
6
Transcription
Date released
13
July, 2019
7
November, 2018
6
February, 2021
5
August, 2017
Available data
2630
bam
2430
bigWig
1410
bed narrowPeak
1264
tsv
949
fastq
871
bigBed narrowPeak
292
tagAlign
268
bed broadPeak
231
bed bed3+
231
bigBed broadPeak
161
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
18
bedpe bed3+
16
hic
11
bed bed3
7
bed bedgraph
6
csv
3
tar
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
31
Homo sapiens
Biosample type
30
tissue
primary cell
1
cell line
Organ
7
heart
6
kidney
6
pancreas
3
liver
3
musculature of body
2
adipose tissue
2
connective tissue
2
spleen
1
blood vessel
1
brain
1
limb
1
pericardium
vasculature
Project
31
AMP
Genome assembly (visualization)
16
GRCh38
9
hg19
Lab
31
AMP-T2D consortium
Audit category:
5
audit script error
biosample_type!
primary cell
month_released!
September, 2018
organ_slims!
vasculature
BIOSAMPLE
ASSAY
31 results
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WGBS
RRBS
single cell RNA-seq
tissue
kidney
1
5
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
+ See 10 more…
cell line
HepG2
1
See all biosamples
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