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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
2
ATAC-seq
2
DNase-seq
1
FAIRE-seq
Assay category
18
DNA binding
5
DNA accessibility
Target of assay
18
histone
18
histone modification
12
broad histone mark
6
narrow histone mark
Date released
306
November, 2017
163
June, 2019
93
May, 2019
69
November, 2018
64
April, 2019
57
October, 2019
50
December, 2017
45
October, 2018
27
December, 2018
23
August, 2017
15
January, 2019
6
October, 2017
2
July, 2019
Available data
229
fastq
226
bigWig
224
bam
109
bed narrowPeak
tsv
73
tagAlign
33
bed bed3+
27
bed broadPeak
23
bigBed narrowPeak
5
bed bedMethyl
5
bigBed bedMethyl
1
bigBed broadPeak
Organism
17
Homo sapiens
Biosample type
22
tissue
primary cell
1
in vitro differentiated cells
Organ
14
pancreas
6
liver
3
connective tissue
2
adipose tissue
Project
23
AMP
Genome assembly (visualization)
23
hg19
22
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
5
inconsistent control read length
1
inconsistent assembly
biosample_type!
primary cell
files.file_type!
tsv
organ_slims!
spleen
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
pancreas
12
liver
5
islet of Langerhans
1
1
adipose tissue
1
right lobe of liver
1
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in vitro differentiated cells
adipocyte
1
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