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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
423
ChIP-seq
Assay category
423
DNA binding
Target of assay
458
transcription factor
424
histone modification
423
histone
257
broad histone mark
165
narrow histone mark
152
control
91
RNA binding protein
82
recombinant protein
35
chromatin remodeller
5
other context
5
other post-translational modification
Date released
89
May, 2019
72
November, 2017
64
August, 2017
59
April, 2019
48
October, 2019
31
December, 2017
30
October, 2018
16
February, 2018
7
January, 2019
7
October, 2017
Available data
638
bigWig
634
bed narrowPeak
581
bam
344
bigBed narrowPeak
223
tagAlign
156
fastq
49
bed broadPeak
22
bed bed3+
14
bigBed broadPeak
1
tagAlign bed3+
Organism
417
Homo sapiens
Biosample type
334
tissue
primary cell
65
in vitro differentiated cells
22
cell line
2
stem cell
Organ
89
brain
63
pancreas
54
blood vessel
54
heart
54
vasculature
48
limb
44
liver
26
connective tissue
24
nerve
20
artery
18
kidney
14
epithelium
12
embryo
6
musculature of body
6
spleen
1
adipose tissue
1
blood
1
bodily fluid
Project
423
AMP
Genome assembly (visualization)
418
GRCh38
369
hg19
Lab
423
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
26
inconsistent control read length
1
inconsistent assembly
biosample_type!
primary cell
BIOSAMPLE
ASSAY
423 results
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Clear Filters
ChIP-seq
tissue
tibial nerve
24
heart left ventricle
23
kidney
18
tibial artery
18
body of pancreas
17
+ See 26 more…
in vitro differentiated cells
adipocyte
25
hepatocyte
12
pancreatic endoderm
10
definitive endodermal cell
4
primitive gut cell
4
+ See 5 more…
cell line
HepG2
15
Panc1
6
GM12878
1
stem cell
hESC
2
See all biosamples
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