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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
Assay category
60
DNA binding
Target of assay
122
transcription factor
112
histone
112
histone modification
75
control
60
broad histone mark
51
narrow histone mark
27
RNA binding protein
12
chromatin remodeller
3
other context
3
other post-translational modification
Date released
26
August, 2017
11
October, 2018
8
February, 2018
6
October, 2017
5
December, 2017
4
January, 2019
Available data
280
bed narrowPeak
280
bigWig
250
bam
200
bigBed narrowPeak
79
tagAlign
60
fastq
20
bed broadPeak
11
bed bed3+
0
hdf5
Organism
56
Homo sapiens
Biosample type
35
tissue
primary cell
24
in vitro differentiated cells
1
stem cell
Organ
liver
25
pancreas
12
connective tissue
7
epithelium
6
brain
4
embryo
4
spleen
Project
60
AMP
Genome assembly (visualization)
59
GRCh38
59
hg19
Lab
60
AMP-T2D consortium
Audit category:
4
missing controlled_by
Audit category:
9
inconsistent control read length
1
inconsistent assembly
biosample_type!
primary cell
organ_slims!
liver
BIOSAMPLE
ASSAY
60 results
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ChIP-seq
tissue
body of pancreas
11
pancreas
8
brain
6
islet of Langerhans
6
spleen
4
in vitro differentiated cells
adipocyte
12
pancreatic endoderm
4
definitive endodermal cell
2
primitive gut cell
2
Posterior foregut
1
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stem cell
hESC
1
See all biosamples
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