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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
119
ChIP-seq
Assay category
119
DNA binding
Target of assay
64
control
55
histone
55
histone modification
33
broad histone mark
22
narrow histone mark
Date released
45
August, 2017
23
May, 2020
23
November, 2017
9
October, 2019
8
October, 2017
7
August, 2021
3
February, 2021
1
May, 2021
Available data
2738
bam
2498
bigWig
bed narrowPeak
1323
tsv
947
fastq
895
bigBed narrowPeak
282
tagAlign
228
bed broadPeak
204
bigBed broadPeak
203
bed bed3+
160
txt
64
xls
23
bed bedMethyl
23
bigBed bedMethyl
17
bedpe bed3+
15
hic
11
bed bed3
7
bed bedgraph
6
csv
3
tar
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
118
Homo sapiens
Biosample type
91
tissue
22
in vitro differentiated cells
6
cell line
primary cell
Organ
46
liver
35
brain
21
connective tissue
7
adipose tissue
5
pancreas
2
artery
2
blood vessel
2
heart
musculature of body
2
vasculature
1
epithelium
Project
119
AMP
Genome assembly (visualization)
3
hg19
Lab
119
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
biosample_type!
primary cell
files.file_type!
bed narrowPeak
organ_slims!
musculature of body
pituitary gland
BIOSAMPLE
ASSAY
119 results
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Clear Filters
ChIP-seq
tissue
liver
43
brain
8
cingulate gyrus
7
subcutaneous abdominal adipose tissue
7
layer of hippocampus
4
+ See 14 more…
in vitro differentiated cells
adipocyte
14
neural progenitor cell
7
pancreatic PP cell
1
cell line
HepG2
3
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
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