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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
133
ChIP-seq
26
ATAC-seq
21
total RNA-seq
5
WGBS
Assay category
133
DNA binding
26
DNA accessibility
21
Transcription
5
DNA methylation
Target of assay
104
transcription factor
26
control
18
RNA binding protein
3
chromatin remodeller
Date released
39
November, 2017
32
December, 2018
27
October, 2018
24
May, 2022
17
November, 2018
15
February, 2018
13
August, 2017
8
January, 2019
6
October, 2017
4
December, 2017
Available data
185
fastq
183
bam
133
bigWig
126
bed narrowPeak
102
bigBed narrowPeak
15
tsv
6
txt
3
bed bedMethyl
3
bigBed bedMethyl
2
bed bed3+
Organism
185
Homo sapiens
Biosample type
88
cell line
82
tissue
primary cell
15
in vitro differentiated cells
Organ
49
liver
45
blood
45
bodily fluid
42
pancreas
26
adipose tissue
26
connective tissue
8
spleen
4
embryo
Project
185
AMP
Genome assembly (visualization)
148
hg19
133
GRCh38
Lab
161
AMP-T2D consortium
24
Kyle Gaulton, UCSD
Audit category:
7
missing controlled_by
biosample_type!
primary cell
BIOSAMPLE
ASSAY
185 results
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ChIP-seq
ATAC-seq
total RNA-seq
WGBS
cell line
GM12878
45
HepG2
43
tissue
islet of Langerhans
18
6
body of pancreas
13
4
subcutaneous adipose tissue
8
1
spleen
7
1
omental fat pad
6
1
+ See 5 more…
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 2 more…
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