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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 192ChIP-seq
Assay category
  • 192DNA binding
Target of assay
  • 105transcription factor
  • 70recombinant protein
  • 65histone
  • 65histone modification
  • 37broad histone mark
  • 28narrow histone mark
  • 22control
  • 12RNA binding protein
  • 11chromatin remodeller
  • 3other context
  • 3other post-translational modification
Date released
  • 71November, 2017
  • 31August, 2017
  • 29October, 2018
  • 26November, 2018
  • 21December, 2017
  • 12January, 2019
  • 2December, 2018
Available data
  • 192bam
  • 192fastq
  • 169bed narrowPeak
  • 169bigWig
  • 139bigBed narrowPeak
Organism
  • 192Homo sapiens
Biosample type
  • 98cell line
  • 48tissue
  • 46in vitro differentiated cells
  • primary cell
Organ
  • 109liver
  • 40connective tissue
  • 20pancreas
  • 15epithelium
  • 13spleen
  • 10blood
  • 10bodily fluid
  • 9adipose tissue
Project
  • 192AMP
Genome assembly (visualization)
  • 169GRCh38
  • 166hg19
Lab
  • 192AMP-T2D consortium
Audit category:
  • 1inconsistent control
Audit category:
  • 2missing controlled_by
Audit category:
  • 3inconsistent control read length
biosample_type!
  • primary cell
BIOSAMPLE
ASSAY

192 results

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Clear Filters
ChIP-seq
cell line
HepG288
GM1287810
tissue
body of pancreas20
spleen13
right lobe of liver6
omental fat pad5
subcutaneous adipose tissue4
in vitro differentiated cells
adipocyte31
hepatocyte15
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