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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
total RNA-seq
16
ATAC-seq
7
ChIP-seq
Assay category
121
Transcription
16
DNA accessibility
7
DNA binding
Target of assay
4
transcription factor
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
601
February, 2021
397
November, 2017
352
August, 2017
309
August, 2021
254
October, 2019
194
May, 2020
160
June, 2019
144
May, 2021
120
July, 2018
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
70
July, 2019
65
May, 2019
61
November, 2019
60
March, 2020
59
February, 2023
47
September, 2023
42
May, 2022
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
128
bam
127
bigWig
121
tsv
6
bed narrowPeak
6
tagAlign
Organism
144
Homo sapiens
Biosample type
85
in vitro differentiated cells
38
tissue
21
cell line
primary cell
Organ
60
pancreas
26
epithelium
3
heart
2
embryo
1
connective tissue
Project
143
AMP
1
T1D
Genome assembly (visualization)
127
GRCh38
127
hg19
Lab
144
AMP-T2D consortium
Kyle Gaulton, UCSD
Audit category:
89
inconsistent ontology term
biosample_type!
primary cell
lab.title!
Kyle Gaulton, UCSD
organ_slims!
vasculature
BIOSAMPLE
ASSAY
144 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
in vitro differentiated cells
cardiomyocytes
59
3
induced pluripotent stem cell
9
pancreatic PP cell
3
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
+ See 9 more…
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
cell line
EndoC_BH1
4
16
1
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