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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
1
ATAC-seq
1
RRBS
1
pCHi-C
Assay category
60
DNA binding
1
DNA accessibility
1
DNA methylation
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
1
January, 2018
1
July, 2019
1
March, 2020
Available data
60
bam
60
fastq
55
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Organism
63
Homo sapiens
Biosample type
61
cell line
2
tissue
primary cell
Organ
706
liver
641
connective tissue
531
pancreas
489
adipose tissue
340
heart
265
brain
199
blood vessel
199
vasculature
158
bone element
139
artery
127
kidney
122
limb
112
epithelium
82
musculature of body
61
blood
61
bodily fluid
56
eye
43
nerve
37
embryo
25
spleen
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
63
AMP
Genome assembly (visualization)
56
hg19
54
GRCh38
Lab
63
AMP-T2D consortium
Audit category:
1
inconsistent control
1
inconsistent ontology term
biosample_type!
primary cell
BIOSAMPLE
ASSAY
63 results
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Clear Filters
ChIP-seq
ATAC-seq
RRBS
pCHi-C
cell line
GM12878
60
1
tissue
gastric (mucosa of stomach)
1
pericardium
1
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