Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
68
candidate regulatory elements
39
target gene predictions
36
chromatin state
7
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
5
May, 2021
3
August, 2017
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
128
bed bed3+
33
bed bed9
2
tsv
Organism
165
Homo sapiens
Biosample type
133
tissue
32
cell line
primary cell
Organ
430
brain
342
kidney
324
musculature of body
277
lung
263
intestine
243
limb
219
heart
181
bodily fluid
172
connective tissue
170
blood
165
large intestine
142
embryo
pancreas
114
epithelium
108
stomach
106
extraembryonic component
104
skin of body
96
vasculature
89
blood vessel
89
liver
86
adipose tissue
85
eye
80
small intestine
75
bone element
68
prostate gland
64
ureter
63
placenta
62
adrenal gland
62
lymph node
48
thymus
46
artery
46
gonad
41
mammary gland
39
spinal cord
35
esophagus
34
spleen
27
uterus
25
nerve
25
testis
23
lymphoid tissue
23
penis
21
ovary
20
thyroid gland
18
skeleton
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
4
lymphatic vessel
4
nose
3
vein
Project
165
AMP
Genome assembly (visualization)
161
hg19
35
GRCh38
biosample_type!
primary cell
month_released!
February, 2024
organ_slims!
pancreas
BIOSAMPLE
TYPE
165 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
26
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 7 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
2
1
1
RKO
1
1
1
1
+ See 3 more…
See all biosamples
Download