Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
29
candidate regulatory elements
15
chromatin state
15
target gene predictions
8
binding sites
7
accessible chromatin
7
histone modifications
3
Fine-mapped variants
3
eQTL
3
gene expression
2
variant allelic effects
Date released
42
September, 2022
30
February, 2021
6
June, 2020
3
February, 2020
3
March, 2020
3
May, 2020
2
January, 2022
January, 2020
1
March, 2024
1
May, 2021
1
November, 2019
Available data
68
bed bed3+
15
bed bed9
7
tsv
1
bigBed bed9
1
bigWig
Organism
92
Homo sapiens
Biosample type
53
cell line
39
tissue
primary cell
Organ
410
brain
336
kidney
321
musculature of body
277
lung
266
intestine
236
limb
212
heart
209
bodily fluid
198
blood
193
embryo
172
connective tissue
168
large intestine
147
pancreas
129
epithelium
108
stomach
106
extraembryonic component
104
skin of body
90
liver
90
vasculature
85
eye
84
adipose tissue
83
blood vessel
80
small intestine
78
uterus
75
bone element
68
prostate gland
63
placenta
62
adrenal gland
62
lymph node
61
ureter
48
thymus
46
gonad
42
artery
41
mammary gland
38
spinal cord
35
esophagus
34
spleen
25
testis
24
lymphoid tissue
24
nerve
23
penis
21
ovary
20
thyroid gland
18
skeleton
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
4
lymphatic vessel
4
nose
3
vein
Project
92
AMP
Genome assembly (visualization)
87
hg19
22
GRCh38
biosample_type!
primary cell
month_released!
January, 2020
May, 2022
BIOSAMPLE
TYPE
92 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
binding sites
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
gene expression
variant allelic effects
cell line
22Rv1
4
2
2
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
LNCAP
2
1
1
1
1
+ See 5 more…
tissue
tibial nerve
6
4
3
2
3
2
2
2
prostate gland
4
2
2
2
1
2
1
prostate
1
See all biosamples
Download