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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
4
Hi-C
3
total RNA-seq
1
WGBS
Assay category
7
DNA binding
4
3D chromatin structure
3
Transcription
1
DNA methylation
Target of assay
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
1
control
Date released
October, 2019
June, 2019
7
May, 2019
5
July, 2019
3
February, 2020
Available data
8
bam
7
bigWig
6
bed narrowPeak
6
bigBed narrowPeak
3
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
15
Homo sapiens
Biosample type
15
tissue
Organ
771
liver
640
connective tissue
578
pancreas
487
adipose tissue
345
heart
231
kidney
170
blood vessel
170
vasculature
bone element
154
brain
116
epithelium
111
artery
61
blood
61
bodily fluid
50
musculature of body
37
embryo
32
eye
25
spleen
21
limb
20
lung
16
skeleton
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
15
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
15
AMP-T2D consortium
biosample_type!
primary cell
month_released!
June, 2019
October, 2019
organ_slims!
bone element
BIOSAMPLE
ASSAY
15 results
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Clear Filters
ChIP-seq
Hi-C
total RNA-seq
WGBS
tissue
muscle of leg
7
1
gastrocnemius medialis
4
1
tibial artery
1
tibial nerve
1
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