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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
3
DNase-seq
Assay category
31
DNA accessibility
19
Transcription
Target of assay
2
histone
2
histone modification
narrow histone mark
Date released
31
February, 2023
19
October, 2019
3
June, 2019
1
February, 2020
Available data
30
bed narrowPeak
5
tsv
3
bam
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
Organism
54
Homo sapiens
Biosample type
54
tissue
primary cell
Organ
661
liver
607
connective tissue
543
pancreas
472
adipose tissue
332
heart
307
kidney
178
blood vessel
178
vasculature
158
bone element
151
brain
132
artery
107
limb
101
epithelium
73
musculature of body
54
eye
50
blood
50
bodily fluid
35
nerve
29
embryo
23
spleen
20
lung
18
ureter
16
skeleton
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
54
AMP
Genome assembly (visualization)
30
hg19
3
GRCh38
Lab
54
AMP-T2D consortium
biosample_type!
primary cell
month_released!
September, 2017
target.investigated_as!
RNA binding protein
narrow histone mark
BIOSAMPLE
ASSAY
54 results
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ATAC-seq
total RNA-seq
pCHi-C
DNase-seq
tissue
retina
15
3
3
islet of Langerhans
1
14
4
pigmented layer of retina
12
2
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