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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
candidate regulatory elements
15
eQTL
14
accessible chromatin
14
gene expression
13
target gene predictions
8
binding sites
6
Fine-mapped variants
6
histone modifications
5
chromatin state
3
variant allelic effects
2
differential activity
Date released
September, 2022
69
February, 2021
9
March, 2020
8
June, 2020
8
May, 2021
6
August, 2021
5
August, 2017
5
February, 2024
5
January, 2022
4
February, 2020
4
January, 2020
3
May, 2020
2
March, 2024
2
September, 2018
1
January, 2018
1
November, 2022
1
October, 2022
Available data
99
bed bed3+
24
tsv
5
bigWig
1
bigBed bed9
Organism
134
Homo sapiens
Biosample type
108
tissue
25
cell line
primary cell
1
in vitro differentiated cells
Organ
263
brain
145
kidney
134
bodily fluid
132
connective tissue
129
blood
127
musculature of body
125
heart
124
embryo
112
epithelium
111
pancreas
105
limb
102
intestine
79
lung
70
large intestine
68
eye
67
vasculature
66
uterus
64
adipose tissue
60
blood vessel
53
liver
53
skin of body
39
stomach
38
lymph node
36
bone element
35
prostate gland
34
artery
31
extraembryonic component
25
ureter
23
small intestine
22
gonad
20
adrenal gland
20
mammary gland
18
placenta
18
spinal cord
17
esophagus
16
nerve
16
spleen
15
thymus
13
pituitary gland
13
testis
11
penis
9
lymphoid tissue
9
ovary
9
skeleton
8
thyroid gland
7
breast
6
mouth
4
lymphatic vessel
4
tongue
4
urinary bladder
4
vagina
3
vein
1
nose
0
pericardium
Project
134
AMP
Genome assembly (visualization)
111
hg19
19
GRCh38
2
hg18
biosample_type!
primary cell
month_released!
September, 2022
BIOSAMPLE
TYPE
134 results
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candidate regulatory elements
eQTL
accessible chromatin
gene expression
target gene predictions
binding sites
Fine-mapped variants
histone modifications
chromatin state
variant allelic effects
differential activity
tissue
subcutaneous adipose tissue
2
6
2
5
3
1
1
1
large intestine
15
1
1
1
adipose tissue
1
4
2
3
2
1
1
omental fat pad
3
2
2
2
3
sigmoid colon
5
1
2
+ See 15 more…
cell line
HT-29
1
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
SW480
1
1
1
1
HCT116
1
2
+ See 4 more…
in vitro differentiated cells
white adipose cell
1
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