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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
143
total RNA-seq
130
ChIP-seq
5
GRO-seq
3
ATAC-seq
2
pCHi-C
Assay category
143
Transcription
130
DNA binding
3
DNA accessibility
Target of assay
87
histone
87
histone modification
50
narrow histone mark
37
broad histone mark
37
control
6
transcription factor
4
RNA binding protein
Date released
667
February, 2021
397
November, 2017
352
August, 2017
315
August, 2021
280
October, 2019
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
63
March, 2020
61
November, 2019
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
272
bam
243
bigWig
144
tsv
92
bed narrowPeak
64
bigBed narrowPeak
50
tagAlign
6
fastq
1
bedpe bed3+
Organism
283
Homo sapiens
Biosample type
275
tissue
primary cell
5
in vitro differentiated cells
2
cell line
1
stem cell
Organ
194
liver
57
heart
23
kidney
2
adipose tissue
2
connective tissue
1
blood
1
bodily fluid
1
embryo
1
musculature of body
Project
283
AMP
Genome assembly (visualization)
238
hg19
226
GRCh38
5
hg18
Lab
283
AMP-T2D consortium
biosample_type!
primary cell
BIOSAMPLE
ASSAY
283 results
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total RNA-seq
ChIP-seq
GRO-seq
ATAC-seq
pCHi-C
tissue
liver
143
50
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
+ See 2 more…
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
white fat cell
1
cell line
GM12878
1
HepG2
1
stem cell
hESC
1
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