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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
3
single cell RNA-seq
2
RNA microarray
Assay category
94
DNA binding
3
Transcription
Target of assay
42
transcription factor
31
histone
31
histone modification
21
control
16
narrow histone mark
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
667
February, 2021
397
November, 2017
352
August, 2017
315
August, 2021
280
October, 2019
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
63
March, 2020
61
November, 2019
47
September, 2023
40
May, 2024
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
94
bam
94
fastq
72
bed narrowPeak
72
bigWig
50
bigBed narrowPeak
15
bed bed3+
4
tsv
Organism
99
Homo sapiens
Biosample type
51
tissue
45
in vitro differentiated cells
primary cell
3
stem cell
Organ
63
liver
20
epithelium
13
embryo
3
kidney
Project
99
AMP
Genome assembly (visualization)
77
GRCh38
77
hg19
Lab
99
AMP-T2D consortium
Audit category:
27
inconsistent control
6
inconsistent ontology term
4
audit script error
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
biosample_type!
primary cell
month_released!
February, 2018
BIOSAMPLE
ASSAY
99 results
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Clear Filters
ChIP-seq
single cell RNA-seq
RNA microarray
tissue
liver
38
right lobe of liver
10
kidney
1
kidney interstitium
1
renal glomerulus
1
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
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stem cell
hESC
3
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