Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
15
total RNA-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
24
DNA binding
19
Transcription
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
control
8
narrow histone mark
Date released
397
November, 2017
314
August, 2021
295
August, 2017
281
February, 2021
279
October, 2019
194
May, 2020
193
May, 2021
162
June, 2019
120
July, 2018
116
February, 2023
115
May, 2019
94
December, 2017
86
November, 2018
80
April, 2019
67
July, 2019
66
May, 2022
62
March, 2020
60
November, 2019
51
October, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
14
May, 2023
November, 2020
8
January, 2021
7
January, 2018
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2022
1
October, 2022
Available data
39
bam
39
fastq
31
bigWig
16
bed narrowPeak
15
tsv
Organism
39
Homo sapiens
Biosample type
39
in vitro differentiated cells
2
cell line
2
stem cell
primary cell
Organ
13
embryo
Project
39
AMP
4
community
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
39
AMP-T2D consortium
4
Anna Gloyn, Oxford
Audit category:
2
inconsistent control read length
biosample_type!
primary cell
month_released!
November, 2020
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
43 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
CRISPR RNA-seq
CRISPRi RNA-seq
shRNA RNA-seq
siRNA RNA-seq
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
+ See 2 more…
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
See all biosamples
Download