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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 544total RNA-seq
  • 84RNA microarray
  • 21ATAC-seq
  • 8ChIP-seq
  • 6single cell RNA-seq
  • 3snDrop-seq
  • 1pCHi-C
Assay category
  • 550Transcription
  • 21DNA accessibility
  • 8DNA binding
Target of assay
  • 5transcription factor
  • 3control
Date released
  • 667February, 2021
  • 397November, 2017
  • 352August, 2017
  • 315August, 2021
  • 280October, 2019
  • 194May, 2020
  • 193May, 2021
  • 163June, 2019
  • 120July, 2018
  • 117February, 2023
  • 115May, 2019
  • 94December, 2017
  • 87November, 2018
  • 80April, 2019
  • 77July, 2019
  • 74October, 2018
  • 66May, 2022
  • 63March, 2020
  • 61November, 2019
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 15May, 2023
  • 10November, 2020
  • 8January, 2018
  • 8January, 2021
  • 6April, 2018
  • 6September, 2017
  • 5December, 2019
  • 5March, 2019
  • 4March, 2023
  • 1August, 2018
  • 1August, 2022
  • 1October, 2022
Available data
  • 569bam
  • 552tsv
  • 549bigWig
  • 89txt
  • 22bed narrowPeak
  • 8tagAlign
  • 6csv
  • 4bed bedgraph
  • 1bed bed3
  • 1bed bed3+
Organism
  • 667Homo sapiens
Biosample type
  • 545tissue
  • 96cell line
  • primary cell
  • 26in vitro differentiated cells
Organ
  • 452connective tissue
  • 386adipose tissue
  • 150bone element
  • 66artery
  • 66blood vessel
  • 66heart
  • 66vasculature
  • 26epithelium
  • 26pancreas
  • 8kidney
  • 8skeleton
  • 6limb
  • 3liver
Project
  • 667AMP
Genome assembly (visualization)
  • 571hg19
  • 566GRCh38
Lab
  • 667AMP-T2D consortium
Audit category:
  • 128inconsistent ontology term
  • 5audit script error
  • 1inconsistent replicate
biosample_type!
  • primary cell
BIOSAMPLE
ASSAY

667 results

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Clear Filters
total RNA-seq
RNA microarray
ATAC-seq
ChIP-seq
single cell RNA-seq
snDrop-seq
pCHi-C
tissue
adipose tissue381
bone element84
bone tissue58
kidney5
visceral abdominal adipose tissue3
cell line
smooth muscle cell of the coronary artery5286
EndoC_BH126
HepG211
iPSC derived cell line2
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)18
adipocyte44
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