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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ATAC-seq
26
total RNA-seq
5
GRO-seq
1
single cell RNA-seq
1
snATAC-seq
Assay category
42
DNA accessibility
27
Transcription
Date released
667
February, 2021
397
November, 2017
352
August, 2017
315
August, 2021
280
October, 2019
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
63
March, 2020
61
November, 2019
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
38
bed narrowPeak
29
fastq
28
bigWig
24
bam
7
txt
1
bed bed3+
Organism
74
Homo sapiens
Biosample type
primary cell
68
tissue
4
in vitro differentiated cells
1
cell line
1
stem cell
Organ
40
liver
24
pancreas
3
musculature of body
1
adipose tissue
1
blood
1
bodily fluid
1
connective tissue
1
embryo
Project
74
AMP
Genome assembly (visualization)
42
hg19
5
hg18
Lab
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
10
AMP-T2D consortium
Audit category:
1
audit script error
biosample_type!
primary cell
month_released!
February, 2020
March, 2023
BIOSAMPLE
ASSAY
74 results
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Clear Filters
ATAC-seq
total RNA-seq
GRO-seq
single cell RNA-seq
snATAC-seq
tissue
liver
20
20
islet of Langerhans
18
6
skeletal muscle tissue
1
1
1
adipose tissue
1
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
cell line
GM12878
1
stem cell
hESC
1
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