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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
23
total RNA-seq
14
small RNA-seq
12
WGBS
6
ATAC-seq
6
RRBS
4
Hi-C
2
FAIRE-seq
Assay category
115
DNA binding
37
Transcription
18
DNA methylation
8
DNA accessibility
4
3D chromatin structure
Target of assay
89
histone
89
histone modification
56
broad histone mark
33
narrow histone mark
22
control
4
RNA binding protein
4
transcription factor
Date released
397
November, 2017
310
August, 2021
276
October, 2019
227
August, 2017
215
February, 2021
194
May, 2020
192
May, 2021
162
June, 2019
120
July, 2018
115
May, 2019
103
February, 2023
94
December, 2017
86
November, 2018
80
April, 2019
67
July, 2019
66
May, 2022
61
March, 2020
60
November, 2019
51
October, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
14
May, 2023
10
November, 2020
8
January, 2021
7
January, 2018
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2022
1
October, 2022
Available data
169
bam
146
bigWig
100
bed narrowPeak
95
bigBed narrowPeak
37
tsv
14
bed bedMethyl
14
bigBed bedMethyl
Organism
182
Homo sapiens
Biosample type
182
tissue
primary cell
Organ
57
blood vessel
57
vasculature
41
heart
39
brain
14
musculature of body
12
limb
10
adipose tissue
connective tissue
8
liver
8
pancreas
6
artery
4
kidney
1
pericardium
Project
182
AMP
Genome assembly (visualization)
143
GRCh38
143
hg19
Lab
182
AMP-T2D consortium
biosample_type!
primary cell
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
182 results
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Clear Filters
ChIP-seq
total RNA-seq
small RNA-seq
WGBS
ATAC-seq
RRBS
Hi-C
FAIRE-seq
tissue
thoracic aorta
16
2
1
ascending aorta
16
1
temporal lobe
15
1
1
aorta
13
2
angular gyrus
13
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