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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
total RNA-seq
14
small RNA-seq
12
WGBS
6
ATAC-seq
6
ChIP-seq
6
RRBS
4
Hi-C
2
FAIRE-seq
Assay category
37
Transcription
18
DNA methylation
8
DNA accessibility
6
DNA binding
4
3D chromatin structure
Target of assay
6
control
Date released
397
November, 2017
314
August, 2021
295
August, 2017
281
February, 2021
279
October, 2019
194
May, 2020
193
May, 2021
162
June, 2019
July, 2018
116
February, 2023
115
May, 2019
94
December, 2017
86
November, 2018
80
April, 2019
67
July, 2019
66
May, 2022
62
March, 2020
60
November, 2019
51
October, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
14
May, 2023
10
November, 2020
8
January, 2021
7
January, 2018
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2022
1
October, 2022
Available data
60
bam
53
bigWig
37
tsv
14
bed bedMethyl
14
bigBed bedMethyl
7
bed narrowPeak
6
fastq
2
bed bed3+
2
bigBed narrowPeak
Organism
73
Homo sapiens
Biosample type
73
tissue
primary cell
Organ
20
heart
12
pancreas
11
brain
adipose tissue
10
connective tissue
8
liver
7
blood vessel
7
musculature of body
7
vasculature
5
limb
4
kidney
1
artery
1
pericardium
Project
73
AMP
Genome assembly (visualization)
53
GRCh38
52
hg19
Lab
73
AMP-T2D consortium
biosample_type!
primary cell
month_released!
July, 2018
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
73 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
ChIP-seq
RRBS
Hi-C
FAIRE-seq
tissue
heart left ventricle
2
4
2
1
islet of Langerhans
6
1
right lobe of liver
2
2
1
body of pancreas
2
2
gastrocnemius medialis
4
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