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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 32pCHi-C
  • 15total RNA-seq
  • 9Hi-C
  • 4ATAC-seq
  • 3ChIP-seq
Assay category
  • 15Transcription
  • 93D chromatin structure
  • 4DNA accessibility
  • 3DNA binding
Target of assay
  • 3histone
  • 3histone modification
  • 3narrow histone mark
Date released
  • 667February, 2021
  • 397November, 2017
  • 352August, 2017
  • 315August, 2021
  • 280October, 2019
  • 194May, 2020
  • 193May, 2021
  • 163June, 2019
  • 120July, 2018
  • 117February, 2023
  • 115May, 2019
  • 94December, 2017
  • 87November, 2018
  • 80April, 2019
  • 77July, 2019
  • 74October, 2018
  • 66May, 2022
  • 63March, 2020
  • 61November, 2019
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 15May, 2023
  • 10November, 2020
  • 8January, 2018
  • 8January, 2021
  • 6April, 2018
  • 6September, 2017
  • 5December, 2019
  • 5March, 2019
  • 4March, 2023
  • 1August, 2018
  • 1August, 2022
  • 1October, 2022
Available data
  • 45tsv
  • 20bigWig
  • 16bam
  • 11bedpe bed3+
  • 9hic
  • 3bed narrowPeak
  • 2ibed
Organism
  • 63Homo sapiens
Biosample type
  • 40tissue
  • 11cell line
  • 8in vitro differentiated cells
  • 4stem cell
  • primary cell
Organ
  • 14pancreas
  • 7heart
  • 5epithelium
  • 5musculature of body
  • 3blood vessel
  • 3liver
  • 3vasculature
  • 2brain
  • 2connective tissue
  • 2intestine
  • 2kidney
  • 1adipose tissue
  • 1adrenal gland
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1lung
  • 1mammary gland
  • 1ovary
  • 1small intestine
  • 1spleen
  • 1stomach
  • 1thymus
  • 1urinary bladder
Project
  • 56AMP
  • 7T1D
Genome assembly (visualization)
  • 31hg19
  • 16GRCh38
Lab
  • 63AMP-T2D consortium
Audit category:
  • 17inconsistent ontology term
biosample_type!
  • primary cell
BIOSAMPLE
ASSAY

63 results

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Clear Filters
pCHi-C
total RNA-seq
Hi-C
ATAC-seq
ChIP-seq
tissue
islet of Langerhans222
psoas muscle122
aorta111
heart left ventricle111
heart right ventricle111
cell line
EndoC_BH1221
early embryonic cell2
MCF-71
RCC 7860 VHL1
RCC 7860 vector1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)211
lymphocyte of B lineage (iPSC)111
embryonic stem cell1
stem cell
mesenchymal stem cell1
mesendoderm1
neural progenitor cell (neural stem cell)1
trophoblast1
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