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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 218ChIP-seq
  • 28total RNA-seq
  • 20ATAC-seq
  • 6DNase-seq
  • 4Hi-C
  • 4pCHi-C
Assay category
  • 218DNA binding
  • 28Transcription
  • 26DNA accessibility
  • 43D chromatin structure
Target of assay
  • 175histone
  • 175histone modification
  • 132narrow histone mark
  • 43broad histone mark
  • 36control
  • 7recombinant protein
  • 7transcription factor
Date released
  • 667February, 2021
  • 397November, 2017
  • 352August, 2017
  • 315August, 2021
  • 280October, 2019
  • 194May, 2020
  • 193May, 2021
  • 163June, 2019
  • 120July, 2018
  • 117February, 2023
  • 115May, 2019
  • 94December, 2017
  • 87November, 2018
  • 80April, 2019
  • 77July, 2019
  • 74October, 2018
  • 66May, 2022
  • 63March, 2020
  • 61November, 2019
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 15May, 2023
  • 10November, 2020
  • 8January, 2018
  • 8January, 2021
  • 6April, 2018
  • 6September, 2017
  • 5December, 2019
  • 5March, 2019
  • 4March, 2023
  • 1August, 2018
  • 1August, 2022
  • 1October, 2022
Available data
  • 219bam
  • 184bigWig
  • 168bed narrowPeak
  • 57bigBed narrowPeak
  • 49tagAlign
  • 14tsv
  • 6bed bed3+
  • 5bed broadPeak
  • 5bigBed broadPeak
  • 3bedpe bed3+
  • 3hic
  • 1hdf5
  • 1tagAlign bed3+
Organism
  • 280Homo sapiens
Biosample type
  • 242tissue
  • primary cell
  • 30cell line
  • 8in vitro differentiated cells
Organ
  • 86brain
  • 69limb
  • 42nerve
  • 26artery
  • 26blood vessel
  • 26vasculature
  • 21eye
  • 19kidney
  • 18pancreas
  • 8heart
  • 6liver
  • 4connective tissue
  • 4gonad
  • 4ovary
  • 2epithelium
  • 2pituitary gland
  • 1adipose tissue
  • 1lymph node
  • 1skin of body
Project
  • 280AMP
Genome assembly (visualization)
  • 191hg19
  • 185GRCh38
Lab
  • 280AMP-T2D consortium
Audit category:
  • 21inconsistent ontology term
Audit category:
  • 1inconsistent assembly
biosample_type!
  • primary cell
BIOSAMPLE
ASSAY

280 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
Hi-C
pCHi-C
tissue
islet of Langerhans2114134
tibial nerve35412
tibial artery2312
heart521
brain51
cell line
Panc11311
RCC 7860 HIF1a re-expression41
RCC 7860 HIF2a over-expression31
RCC 7860 vector31
glomerular visceral epithelial cell11
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)111
cardiomyocytes (cardiac muscle cell)111
adipocyte2
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