Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 673chromatin state
  • 673target gene predictions
  • 672candidate regulatory elements
  • 5histone modifications
  • 1accessible chromatin
Date released
  • 2639February, 2025
  • 2134February, 2021
  • 2024September, 2022
  • 236June, 2020
  • 226February, 2024
  • 133May, 2021
  • 123March, 2020
  • 86August, 2021
  • 70October, 2022
  • 69January, 2022
  • 69May, 2020
  • 66January, 2020
  • 48February, 2020
  • 35November, 2022
  • 32March, 2025
  • 29August, 2017
  • 29March, 2024
  • 28February, 2023
  • 15March, 2023
  • 14November, 2019
  • 9May, 2019
  • 9May, 2022
  • 8April, 2019
  • 7October, 2019
  • 5September, 2023
  • 3September, 2018
  • 2January, 2018
  • 1August, 2020
  • 1August, 2022
Available data
  • 1351bed bed3+
  • 673bed bed9
  • 1bigWig
Organism
  • 2024Homo sapiens
Collection Tags
  • 2018EpiMap
  • 4AMP
  • 1ChIP-Atlas
Biosample type
  • 1377tissue
  • 542cell line
  • primary cell
  • 105in vitro differentiated cells
Organ
  • 198kidney
  • 198lung
  • 198musculature of body
  • 168brain
  • 164intestine
  • 138limb
  • 99heart
  • 98large intestine
  • 75bodily fluid
  • 75extraembryonic component
  • 69blood
  • 69embryo
  • 69stomach
  • 57small intestine
  • 51skin of body
  • 45connective tissue
  • 45placenta
  • 42adrenal gland
  • 40liver
  • 40pancreas
  • 39bone element
  • 39ureter
  • 33prostate gland
  • 33thymus
  • 30blood vessel
  • 30vasculature
  • 24adipose tissue
  • 24gonad
  • 24lymph node
  • 21mammary gland
  • 21spinal cord
  • 18epithelium
  • 18esophagus
  • 18eye
  • 18spleen
  • 15lymphoid tissue
  • 12artery
  • 12ovary
  • 12penis
  • 12testis
  • 12thyroid gland
  • 12uterus
  • 9mouth
  • 9nerve
  • 9skeleton
  • 6breast
  • 6tongue
  • 6urinary bladder
  • 6vagina
  • 3nose
Project
  • 2024AMP
Genome assembly (visualization)
  • 2024hg19
  • 678GRCh38
biosample_type!
  • primary cell
BIOSAMPLE
TYPE

2024 results

search-icontable-tab-icon
Clear Filters
chromatin state
target gene predictions
candidate regulatory elements
histone modifications
accessible chromatin
tissue
heart191919
stomach191919
brain161616
lung161616
muscle of arm161616
cell line
A549181818
K562666
MCF-7555
HeLa-S3333
endometrium adenocarcinoma333
in vitro differentiated cells
hematopoietic multipotent progenitor cell101010
neural progenitor cell444
adipocyte222
endodermal cell222
mesenchymal stem cell222
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego