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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
329
ChIP-seq
Assay category
329
DNA binding
Target of assay
648
histone
648
histone modification
329
narrow histone mark
318
broad histone mark
177
control
149
transcription factor
41
RNA binding protein
12
chromatin remodeller
7
recombinant protein
5
nucleotide modification
3
other context
3
other post-translational modification
Date released
130
October, 2019
41
August, 2017
33
May, 2019
28
November, 2017
23
April, 2019
15
May, 2024
12
May, 2021
11
October, 2018
9
December, 2017
8
February, 2018
7
August, 2021
4
November, 2019
3
January, 2019
3
March, 2020
2
October, 2017
Available data
276
bigWig
274
bed narrowPeak
253
bam
108
bigBed narrowPeak
86
tagAlign
50
fastq
14
bed broadPeak
11
bed bed3+
1
tagAlign bed3+
Organism
327
Homo sapiens
Biosample type
268
tissue
primary cell
50
in vitro differentiated cells
10
cell line
1
stem cell
Organ
114
brain
liver
42
pancreas
38
heart
29
connective tissue
18
blood vessel
18
vasculature
15
limb
14
epithelium
adipose tissue
10
kidney
9
musculature of body
8
embryo
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
325
AMP
4
T1D
Genome assembly (visualization)
268
GRCh38
247
hg19
Lab
304
AMP-T2D consortium
15
Patrick T. Ellinor, Broad
10
Kyle Gaulton, UCSD
Audit category:
10
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
5
inconsistent control read length
biosample_type!
primary cell
organ_slims!
adipose tissue
liver
pericardium
BIOSAMPLE
ASSAY
329 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
37
left cardiac atrium
15
kidney
10
heart left ventricle
9
layer of hippocampus
8
+ See 96 more…
in vitro differentiated cells
adipocyte
16
embryonic stem cell
11
neural progenitor cell
7
pancreatic endoderm
6
Hepatic endoderm
2
+ See 6 more…
cell line
EndoC_BH1
6
Panc1
3
GM12878
1
stem cell
hESC
1
See all biosamples
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