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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 54total RNA-seq
  • 45ATAC-seq
  • 34ChIP-seq
  • 4DNase-seq
  • 2single cell RNA-seq
Assay category
  • 56Transcription
  • 49DNA accessibility
  • 34DNA binding
Target of assay
  • 20histone
  • 20histone modification
  • 14broad histone mark
  • 9control
  • 6narrow histone mark
  • 5transcription factor
  • 1RNA binding protein
Date released
  • 66February, 2021
  • 35February, 2023
  • 26October, 2019
  • 5May, 2019
  • 2August, 2021
  • 2February, 2020
  • 2June, 2019
  • 1July, 2019
Available data
  • 100bam
  • 83bigWig
  • 74bed narrowPeak
  • 56tsv
  • 25bigBed narrowPeak
  • 6tagAlign
  • 4bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
Organism
  • 139Homo sapiens
Biosample type
  • 73tissue
  • 66cell line
  • primary cell
Organ
  • 777liver
  • 645connective tissue
  • 600pancreas
  • 489adipose tissue
  • 380heart
  • 318kidney
  • 265brain
  • 199blood vessel
  • 199vasculature
  • 158bone element
  • 139artery
  • 122limb
  • 118epithelium
  • 82musculature of body
  • 61blood
  • 61bodily fluid
  • 56eye
  • 43nerve
  • 37embryo
  • 25spleen
  • 20lung
  • 18ureter
  • 16skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1pericardium
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 139AMP
Genome assembly (visualization)
  • 126GRCh38
  • 91hg19
Lab
  • 139AMP-T2D consortium
biosample_type!
  • primary cell
BIOSAMPLE
ASSAY

139 results

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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
tissue
coronary artery13652
tibial artery11232
pulmonary artery2
cell line
smooth muscle cell of the coronary artery5286
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