Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 312target gene predictions
  • 102candidate regulatory elements
  • 68chromatin state
  • 48histone modifications
  • 36Fine-mapped variants
  • 33accessible chromatin
  • 29eQTL
  • 19gene expression
  • 14binding sites
  • 11variant allelic effects
Date released
  • 240July, 2026
  • 168September, 2022
  • 105February, 2021
  • 38March, 2020
  • 21January, 2020
  • 20June, 2020
  • 18February, 2020
  • 18January, 2022
  • 12May, 2020
  • 11May, 2021
  • 6August, 2017
  • 4May, 2019
  • 4October, 2022
  • 3September, 2023
  • 1February, 2024
  • 1February, 2025
  • 1March, 2024
  • 1November, 2019
Available data
  • 535bed bed3+
  • 67tsv
  • 62bed bed9
  • 13bigWig
  • 6bigBed bed9
Organism
  • 671Homo sapiens
Collection Tags
  • 240ENCODE-rE2G
  • 168EpiMap
  • 78ChIP-Atlas
  • 61GTEx
  • 55ENCODE
  • 26DGA
  • 17T1D
  • 17T2D
  • 17eQTLCatalogue
  • 5AMP
Biosample type
  • 569tissue
  • primary cell
  • 90cell line
  • 12in vitro differentiated cells
  • 1stem cell
Organ
  • 2899blood
  • 2844bodily fluid
  • 2738blood vessel
  • 2733vasculature
  • 2639vein
  • 672brain
  • 421kidney
  • 362lung
  • 335intestine
  • 324musculature of body
  • 283heart
  • 243limb
  • 220large intestine
  • 193embryo
  • 180connective tissue
  • 169pancreas
  • 131extraembryonic component
  • 130epithelium
  • 129stomach
  • 125skin of body
  • 105liver
  • 93eye
  • 93small intestine
  • 90adipose tissue
  • 88bone element
  • 88uterus
  • 86placenta
  • 77adrenal gland
  • 76prostate gland
  • 73ureter
  • 65muscle organ
  • 62lymph node
  • 60gonad
  • 57thymus
  • 54mammary gland
  • 51artery
  • 45spinal cord
  • 39spleen
  • 37esophagus
  • 30ovary
  • 30testis
  • 25nerve
  • 24lymphoid tissue
  • 24thyroid gland
  • 23penis
  • 19skeleton
  • 17mouth
  • 15breast
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 4lymphatic vessel
  • 4nose
  • 1embryonic structure
  • 1gallbladder
Project
  • 672AMP
Genome assembly (visualization)
  • 388hg19
  • 380GRCh38
biosample_type!
  • primary cell
BIOSAMPLE
TYPE

672 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
histone modifications
Fine-mapped variants
accessible chromatin
eQTL
gene expression
binding sites
variant allelic effects
tissue
brain302918322111
head of caudate nucleus86
dorsolateral prefrontal cortex5711
posterior cingulate gyrus48
caudate nucleus454132211
cell line
SK-N-DZ44211
SK-N-SH5421
pituitary stalk10
SK-N-MC221112
BE(2)-C111112
in vitro differentiated cells
brain2
hippocampal neuron11
ESC dervived hypothalamic neuron (arcuate nucleus)1
ESC dervived hypothalamic progenitor (arcuate nucleus)1
astrocyte1
stem cell
undifferentiated ESC (H9 cell line)1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego