Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
150
candidate regulatory elements
89
chromatin state
85
target gene predictions
80
accessible chromatin
21
gene expression
16
histone modifications
15
binding sites
11
variant allelic effects
9
Fine-mapped variants
9
eQTL
1
caQTL
Date released
219
September, 2022
110
February, 2021
26
February, 2023
22
November, 2022
17
June, 2020
16
March, 2020
13
January, 2020
12
May, 2020
9
February, 2020
8
August, 2021
6
April, 2019
6
February, 2024
6
May, 2021
5
January, 2022
3
March, 2024
3
November, 2019
2
October, 2019
1
August, 2017
1
May, 2019
1
October, 2022
Available data
364
bed bed3+
83
bed bed9
47
bigWig
34
tsv
10
bigBed bed9
Organism
486
Homo sapiens
Biosample type
407
tissue
primary cell
72
cell line
7
in vitro differentiated cells
Organ
431
brain
343
kidney
325
musculature of body
277
lung
266
intestine
243
limb
224
heart
209
bodily fluid
198
blood
193
embryo
177
connective tissue
168
large intestine
151
pancreas
130
epithelium
108
stomach
106
extraembryonic component
104
skin of body
97
vasculature
93
liver
90
blood vessel
88
adipose tissue
86
eye
80
small intestine
78
uterus
75
bone element
68
prostate gland
64
ureter
63
placenta
62
adrenal gland
62
lymph node
48
thymus
46
artery
46
gonad
41
mammary gland
39
spinal cord
35
esophagus
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
penis
21
ovary
20
thyroid gland
18
skeleton
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
4
lymphatic vessel
4
nose
3
vein
Project
486
AMP
Genome assembly (visualization)
458
hg19
123
GRCh38
biosample_type!
primary cell
BIOSAMPLE
TYPE
486 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
gene expression
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
eQTL
caQTL
tissue
heart
37
21
20
5
3
1
1
2
stomach
40
19
21
3
1
1
1
retina
6
3
3
23
1
1
1
1
1
heart left ventricle
11
8
7
3
1
1
2
1
coronary artery
3
3
3
3
1
2
3
2
1
+ See 21 more…
cell line
22Rv1
4
2
2
1
1
WERI-Rb-1
2
1
1
1
1
2
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
cardiac fibroblast
1
See all biosamples
Download