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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
total RNA-seq
16
ATAC-seq
5
pCHi-C
3
DNase-seq
2
ChIP-seq
Assay category
19
DNA accessibility
17
Transcription
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
21
October, 2019
17
February, 2023
3
June, 2019
1
February, 2020
1
March, 2020
Available data
18
bed narrowPeak
4
tsv
3
bam
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
Organism
43
Homo sapiens
Biosample type
43
tissue
Organ
777
liver
645
connective tissue
pancreas
489
adipose tissue
380
heart
318
kidney
265
brain
199
blood vessel
199
vasculature
158
bone element
139
artery
122
limb
epithelium
82
musculature of body
61
blood
61
bodily fluid
56
eye
43
nerve
37
embryo
25
spleen
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
43
AMP
Genome assembly (visualization)
18
hg19
3
GRCh38
Lab
43
AMP-T2D consortium
biosample_type!
primary cell
organ_slims!
epithelium
pancreas
BIOSAMPLE
ASSAY
43 results
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Clear Filters
total RNA-seq
ATAC-seq
pCHi-C
DNase-seq
ChIP-seq
tissue
islet of Langerhans
14
1
4
2
retina
3
15
3
small intestine
1
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