Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 143candidate regulatory elements
  • 76target gene predictions
  • 71chromatin state
  • 10accessible chromatin
  • 7Fine-mapped variants
  • 7eQTL
  • 7gene expression
  • 4differential activity
  • 4histone modifications
  • 4variant allelic effects
  • 2binding sites
Date released
  • 198September, 2022
  • 83February, 2021
  • 9March, 2020
  • 6June, 2020
  • 6May, 2021
  • 5February, 2020
  • 5March, 2025
  • 5October, 2025
  • 4January, 2020
  • 4May, 2020
  • 3August, 2017
  • 2March, 2024
  • 2May, 2019
  • 1August, 2021
  • 1February, 2024
  • 1January, 2022
Available data
  • 243bed bed3+
  • 68bed bed9
  • 19tsv
  • 4bigWig
  • 2bigBed bed9
Organism
  • 335Homo sapiens
Collection Tags
  • 198EpiMap
  • 76ENCODE
  • 15 T2DKP
  • 14DGA
  • 12ChIP-Atlas
  • 12GTEx
  • 11STARNET
  • 5T2DKP
  • 2AMP
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 316tissue
  • primary cell
  • 17cell line
  • 2in vitro differentiated cells
Organ
  • 2850bodily fluid
  • 2839blood
  • 2746vasculature
  • 2739blood vessel
  • 2638vein
  • 432brain
  • 343kidney
  • 335musculature of body
  • 277lung
  • 266intestine
  • 243limb
  • 224heart
  • 193embryo
  • 192connective tissue
  • 168large intestine
  • 151pancreas
  • 130epithelium
  • 108stomach
  • 106extraembryonic component
  • 104skin of body
  • 103adipose tissue
  • 103liver
  • 86eye
  • 80small intestine
  • 78uterus
  • 75bone element
  • 68prostate gland
  • 64ureter
  • 63placenta
  • 62adrenal gland
  • 62lymph node
  • 55artery
  • 48thymus
  • 46gonad
  • 41mammary gland
  • 39spinal cord
  • 35esophagus
  • 34spleen
  • 25nerve
  • 25testis
  • 24lymphoid tissue
  • 23penis
  • 21ovary
  • 20thyroid gland
  • 18skeleton
  • 15mouth
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 4lymphatic vessel
  • 4nose
Project
  • 335AMP
Genome assembly (visualization)
  • 318hg19
  • 82GRCh38
biosample_type!
  • primary cell
BIOSAMPLE
TYPE

335 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
Fine-mapped variants
eQTL
gene expression
differential activity
histone modifications
variant allelic effects
binding sites
tissue
muscle of arm33161611
muscle of leg2714152
muscle of back281313
psoas muscle7841
gastrocnemius medialis8541
cell line
LHCN-M2211111
A673221
SJCRH302111
in vitro differentiated cells
myotube11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego