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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1271total RNA-seq
  • 182single cell RNA-seq
  • 86RNA microarray
  • 16small RNA-seq
  • 10MeRIP-seq
  • 5STARR-seq
  • 3snDrop-seq
Assay category
  • 1469Transcription
Target of assay
  • 5control
  • 5nucleotide modification
Date released
  • 637February, 2021
  • 185August, 2021
  • 143May, 2020
  • 127May, 2021
  • 120July, 2018
  • 89August, 2017
  • 47July, 2019
  • 47September, 2023
  • 27May, 2022
  • 25February, 2020
  • 24October, 2019
  • 20November, 2019
  • 18February, 2023
  • 15February, 2018
  • 15March, 2020
  • 10November, 2020
  • 9April, 2020
  • 6April, 2018
  • 5December, 2019
  • 4May, 2023
Available data
  • 1288tsv
  • 1145bam
  • 1139bigWig
  • 156txt
  • 118fastq
  • 6csv
Organism
  • 1573Homo sapiens
Biosample type
  • 1316tissue
  • primary cell
  • 138in vitro differentiated cells
  • 119cell line
Organ
  • 466connective tissue
  • 399adipose tissue
  • 334pancreas
  • 185liver
  • 162heart
  • 146bone element
  • 126kidney
  • 65blood vessel
  • 65vasculature
  • 56artery
  • 45epithelium
  • 21brain
  • 19eye
  • 14embryo
  • 9lung
  • 7musculature of body
  • 4skeleton
  • 3limb
  • 1nerve
  • 1spinal cord
Project
  • 1508AMP
  • 47KPMP
  • 9LungMap
  • 9T1D
Genome assembly (visualization)
  • 1140GRCh38
  • 1140hg19
Lab
  • 1395AMP-T2D consortium
  • 60Katalin Susztak, Upenn
  • 47KPMP
  • 20Karen Mohlke, UNC
  • 17Kyle Gaulton, UCSD
  • 15Bing Ren, UCSD
  • 10Rohit N. Kulkarni, M.D., Ph.D.
  • 9Xin Sun, UCSD
Audit category:
  • 219inconsistent ontology term
  • 9audit script error
biosample_type!
  • primary cell
BIOSAMPLE
ASSAY

1573 results

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Clear Filters
total RNA-seq
single cell RNA-seq
RNA microarray
small RNA-seq
MeRIP-seq
STARR-seq
snDrop-seq
tissue
adipose tissue382
islet of Langerhans29264
liver16711
kidney4964
bone element84
in vitro differentiated cells
cardiomyocytes59
cardiac precursors (cardiac muscle cell)19
induced pluripotent stem cell9
embryonic stem cell7
neural progenitor cell7
cell line
smooth muscle cell of the coronary artery52
EndoC_BH1336
HepG292
H1-hESC8
HEK293T2
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