Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1900target gene predictions
  • 1343candidate regulatory elements
  • 747chromatin state
  • 207gene expression
  • 125eQTL
  • 74Fine-mapped variants
  • 70binding sites
  • 60variant allelic effects
  • 12differential activity
  • 7accessible chromatin
  • 4variant to gene
  • 2caQTL
  • 2other
  • 2sQTL
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2018September, 2022
  • 915July, 2026
  • 729February, 2021
  • 203February, 2024
  • 123March, 2020
  • 120May, 2021
  • 70October, 2022
  • 69May, 2020
  • 66January, 2022
  • 55August, 2021
  • 48February, 2020
  • 29August, 2017
  • 29March, 2024
  • 22January, 2020
  • 15March, 2023
  • 9May, 2019
  • 8April, 2019
  • 8May, 2022
  • 5September, 2023
  • 4March, 2026
  • 3February, 2023
  • 3October, 2019
  • 2January, 2018
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
Available data
  • 3502bed bed3+
  • 2939tsv
  • 705bed bed9
  • 36bigBed bed9
  • 24csv
  • 9bigWig
  • 7bed bed9+
  • 4txt
  • 1bam
Organism
  • 7191Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2019EpiMap
  • 915ENCODE-rE2G
  • 758ENCODE
  • 246DGA
  • 1684DN
  • 150GTEx
  • 129AMP
  • 85 T2DKP
  • 83T1D
  • 66T2D
  • 66eQTLCatalogue
  • 31T2DKP
  • 19CMDGA
  • 8BLUEPRINT
Biosample type
  • 5637tissue
  • primary cell
  • 1238cell line
  • 313in vitro differentiated cells
  • 4stem cell
Organ
  • 2842blood
  • 2785bodily fluid
  • 2724blood vessel
  • 2712vasculature
  • 2637vein
  • 583brain
  • 386kidney
  • 347lung
  • 313intestine
  • 308musculature of body
  • 255heart
  • 219limb
  • 203large intestine
  • 164embryo
  • 137pancreas
  • 131connective tissue
  • 125stomach
  • 124extraembryonic component
  • 99skin of body
  • 92small intestine
  • 85liver
  • 84uterus
  • 82placenta
  • 80adipose tissue
  • 76adrenal gland
  • 69ureter
  • 67bone element
  • 65muscle organ
  • 56prostate gland
  • 54gonad
  • 54thymus
  • 53epithelium
  • 44mammary gland
  • 42spinal cord
  • 41artery
  • 40lymph node
  • 36spleen
  • 35esophagus
  • 35eye
  • 29ovary
  • 25testis
  • 23thyroid gland
  • 22nerve
  • 21lymphoid tissue
  • 16mouth
  • 15penis
  • 14breast
  • 12pituitary gland
  • 12urinary bladder
  • 12vagina
  • 11skeleton
  • 11tongue
  • 3nose
  • 1embryonic structure
  • 1gallbladder
Project
  • 7175AMP
  • 13community
  • 5ITG
  • 1T1D
Genome assembly (visualization)
  • 3333hg19
  • 1959GRCh38
  • 4hg18
biosample_type!
  • primary cell
software_used.software.name!
  • macs
BIOSAMPLE
TYPE

7194 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
candidate regulatory elements
chromatin state
gene expression
eQTL
Fine-mapped variants
binding sites
variant allelic effects
differential activity
accessible chromatin
variant to gene
caQTL
other
sQTL
representative DNase hypersensitivity sites
tissue
whole blood26351
heart383721421
stomach42401911
head of caudate nucleus86
muscle of arm3333161
cell line
A5493321181
HeLa-S359531
H1-hESC391181
K56230771
MCF-713951
in vitro differentiated cells
hematopoietic multipotent progenitor cell2219101
neural progenitor cell6547
adipocyte7461
cardiomyocytes11
endodermal cell442
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego