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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 104ChIP-seq
Assay category
  • 104DNA binding
Target of assay
  • 780histone modification
  • 779histone
  • 504transcription factor
  • 399narrow histone mark
  • 379broad histone mark
  • 308control
  • 104RNA binding protein
  • 89recombinant protein
  • 35chromatin remodeller
  • 5nucleotide modification
  • 5other context
  • 5other post-translational modification
Date released
  • 34November, 2017
  • 21November, 2018
  • 11October, 2018
  • 6August, 2017
  • 6January, 2019
  • 5May, 2021
  • 5May, 2024
  • 4April, 2019
  • 4December, 2017
  • 4May, 2019
  • 2December, 2018
  • 1August, 2021
  • 1November, 2019
Available data
  • 96bigWig
  • 95bed narrowPeak
  • 93bam
  • 84fastq
  • 83bigBed narrowPeak
  • 4bed broadPeak
  • 4bigBed broadPeak
  • 2bed bed3+
  • 1tar
Organism
  • 104Homo sapiens
Biosample type
  • 65cell line
  • 28tissue
  • 11in vitro differentiated cells
  • primary cell
Organ
  • 58liver
  • 10blood
  • 10bodily fluid
  • 10heart
  • 9connective tissue
  • 9pancreas
  • 5adipose tissue
  • 3blood vessel
  • 3epithelium
  • 3vasculature
  • 1artery
  • 1kidney
Project
  • 104AMP
Genome assembly (visualization)
  • 91GRCh38
  • 90hg19
Lab
  • 93AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 1inconsistent ontology term
Audit category:
  • 3missing controlled_by
Audit category:
  • 6inconsistent control read length
  • 3inconsistent control run_type
biosample_type!
  • primary cell
BIOSAMPLE
ASSAY

104 results

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Clear Filters
ChIP-seq
cell line
HepG254
GM1287810
EndoC_BH11
tissue
body of pancreas5
left cardiac atrium5
heart left ventricle3
omental fat pad3
islet of Langerhans2
in vitro differentiated cells
embryonic stem cell5
adipocyte4
hepatocyte2
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