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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 303ChIP-seq
  • 5MeRIP-seq
Assay category
  • 303DNA binding
Target of assay
  • 780histone modification
  • 779histone
  • 504transcription factor
  • 399narrow histone mark
  • 379broad histone mark
  • 308control
  • 104RNA binding protein
  • 89recombinant protein
  • 35chromatin remodeller
  • 5nucleotide modification
  • 5other context
  • 5other post-translational modification
Date released
  • 68November, 2017
  • 37August, 2017
  • 36October, 2019
  • 29October, 2018
  • 23May, 2020
  • 22May, 2019
  • 21December, 2017
  • 14April, 2019
  • 11August, 2021
  • 8February, 2018
  • 6May, 2021
  • 6November, 2018
  • 6September, 2017
  • 5November, 2020
  • 4December, 2018
  • 4January, 2019
  • 3February, 2021
  • 3October, 2017
  • 2November, 2019
Available data
  • 274bam
  • 152fastq
  • 66tagAlign
  • 13bigWig
  • 9bed bed3+
Organism
  • 307Homo sapiens
Biosample type
  • 187tissue
  • 83cell line
  • 37in vitro differentiated cells
  • primary cell
  • 1stem cell
Organ
  • 107liver
  • 41pancreas
  • 32connective tissue
  • 25brain
  • 24adipose tissue
  • 18blood vessel
  • 18heart
  • 18vasculature
  • 17limb
  • 11nerve
  • 9artery
  • 9epithelium
  • 9kidney
  • 8spleen
  • 7embryo
  • 6blood
  • 6bodily fluid
  • 4musculature of body
Project
  • 308AMP
Genome assembly (visualization)
  • 22hg19
  • 9GRCh38
Lab
  • 294AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Rohit N. Kulkarni, M.D., Ph.D.
  • 4Bing Ren, UCSD
Audit category:
  • 10inconsistent ontology term
biosample_type!
  • primary cell
BIOSAMPLE
ASSAY

308 results

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Clear Filters
ChIP-seq
MeRIP-seq
tissue
liver43
islet of Langerhans132
tibial nerve11
subcutaneous adipose tissue10
body of pancreas9
cell line
HepG260
GM128786
Panc16
EndoC_BH123
smooth muscle cell of the coronary artery2
in vitro differentiated cells
adipocyte8
neural progenitor cell7
embryonic stem cell6
pancreatic endoderm5
Hepatic endoderm2
stem cell
hESC1
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