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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1627
candidate regulatory elements
1273
target gene predictions
969
histone modifications
830
accessible chromatin
812
binding sites
111
variant allelic effects
34
chromatin state
13
caQTL
9
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
Date released
2352
February, 2021
1593
September, 2022
304
November, 2021
280
June, 2020
271
February, 2024
267
May, 2021
129
May, 2020
101
October, 2022
63
January, 2020
51
August, 2021
41
November, 2022
39
May, 2024
37
March, 2020
36
January, 2021
31
February, 2023
29
August, 2017
19
April, 2020
15
May, 2022
11
November, 2019
5
January, 2022
4
September, 2023
3
October, 2019
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
Available data
5689
bed bed3+
829
bed bed9
821
tsv
483
bigWig
108
txt
38
bigBed bed9
34
bed bed9+
21
csv
2
bigBed narrowPeak
1
bam
Organism
5643
Homo sapiens
Biosample type
2105
cell line
1684
tissue
1551
primary cell
347
in vitro differentiated cells
stem cell
Organ
557
epithelium
337
connective tissue
309
kidney
308
brain
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
177
embryo
175
heart
175
limb
166
vasculature
165
skin of body
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
103
liver
98
eye
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5325
AMP
304
ENCODE
40
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5681
hg19
788
GRCh38
1
hg18
biosample_type!
stem cell
organ_slims!
ovary
pancreas
stomach
BIOSAMPLE
TYPE
5689 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 755 more…
tissue
heart
37
20
1
5
1
2
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
lung
33
17
+ See 200 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
6
endothelial cell
3
7
1
15
2
2
2
1
+ See 314 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
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